First off, grab the snesadvance.dat that Dantheman posted over at Pocketheaven around December, 2007.
Second off, make sure that the ROM you are using has the same CRC as the ROM listed in the snesadvance.dat file.
Third, you probably want to scour a few message boards, this one included for some of the miscellaneous updates that Dantheman has made but not incorporated into the Pocketheaven file.
I'm 2 hours into Super Metroid (boo for wall-jumping) and haven't had slowdown once.
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